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Exact(2)
Such a profile of alignment scores summarizes the differences between a given sequence and a given family of allergen proteins.
Therefore, to better understand the sequence/structure relationship of amyloid fibrils, a meaningful predictive model is required that describes the relationship between a given sequence and its mutational neighborhood.
Similar(58)
A criterion is also provided to assess the appropriateness between observed belief functions and a given sequence model.
Epigenetic distance corresponds to a measure of the net dissimilarity in DNA methylation profiles of a given sequence between two samples, indicating the number of pair-wise methylation differences.
To validate the relative enrichment of proteins or specific histone modifications at a given sequence a ratio between the relative quantities of IP and TI was established.
The second type of mismatch is the primer-template (PT) mismatch, in which a nucleotide difference is known to exist between a given primer and a given (sequenced) target DNA.
This of course is necessarily arbitrary, since as mentioned above it is not known what the exact level of similarity is between any given sequence pair.
To identify sites of contrasting conservation between ROPK subfamilies, and between all ROPKs and the broader protein kinase superfamily, we compared aligned sites between two given sequence sets by applying a multinomial log-likelihood test (G-test) [ 78] of the residue compositions of each column in the two sets.
A high Grey relational grade corresponds to intense relational degree between the given sequence and the reference sequence.
%MinMax defines the relationship between a given mRNA sequence and hypothetical sequences encoding the same protein using the most rare (minimum) or most common (maximum) codons, as a function of the arithmetic mean of all possible codon usage frequencies.
In this paper, we apply a dynamic time warping (DTW) algorithm [ 21] to align the rows of matrices, which is a technique to find an optimal alignment between two given sequences.
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