Sentence examples for between a codon sequence from inspiring English sources
In all of these situations, the nonlinear mapping between a codon sequence and η makes direct evaluation of the likelihood function difficult.
In the case of nonoverlapping ORFs, there are two equally shortest evolutionary pathways between a pair of codon sequences with two differences (e.g., to evolve from AAA to AGG, one can go through AAG or AGA) and six equally shortest pathways when it harbors three differences (Nei and Gojobori 1986).
To describe amino acid exchange frequencies in terms of the genetic code, we determine for each exchange the average distance between their codon sequences.
Provocative evidence for the theory is provided by the high-frequency insertion of introns between codon sequences, phase 0 intron, and the conservation of intron insertion sites in the coding regions of orthologous proteins from a phylogenetically wide range of taxis [ 23].
On average, the codon sequence distance between glutamic acid and glycine is 1.75 nucleotides.
A rare codon cluster can impede ribosome translation of the rare codon sequence.
To describe the differences between amino acids in terms of the genetic code we determined the codon sequence difference for each codon pair that can be associated with an amino acid exchange and averaged over all sequence distances to yield the mean codon distance.
In analogy to the physico-chemical forces, the genetic code is the underlying structure that facilitates exchanges between amino acids whose codon sequences are similar and makes those exchanges harder whose codon sequences are dissimilar.
Due to DNA substitutions between the porcine and bovine codon sequences of one of the two primer regions, species-specific RT-PCR were designed (Table 1) for both NCs and NPCs.
In the cases where the catfish transcripts did not show high similarity to reference protein, ORF identified by finding the longest stretch of uninterrupted sequence between a start codon and a stop codon in both strand orientations.
