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These results contradict the previous ITS phylogeny of [ 23] but agree with these data after their re-analysis with better fit models (see methods).
More recently, a resequencing study of mtDNA and Y-chromosome stretches, performed in the same set of sub-Saharan African populations, has found that signals of population expansion in food-producing populations, including one combined Bantu sample, were limited to the mtDNA, while Y-chromosome data better fit models of population stationarity [ 68].
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To provide a better fit model to increase the quality of motifs identified by ChIP-Seq, a more sophisticated model that involves the intramotif dependency should be considered.
All independent variables were ln-transformed to have the non-linear patterns better fit model assumptions of a linear association between the independent and dependent variables [ 17, 26, 30].
In our empirical analysis, we have used the natural logarithm of the amount paid informally as this yielded better fitted models.
The correct value of K is determined by the estimated posterior probabilities, for which values closer to zero indicate a better fitted model.
Lower likelihood scores indicate a better fitted model.
Spatial Bayesian models provide better-fitting models compared to non-spatial models.
Under the better-fit model, the duplication rate in Sternorrhyncha increased ~11X above the background rate of the phylogeny for the AAAP family (Table 3).
The first predictive model (model 3: IPO) has a better fit than model 2 (confirmatory model with second-order factor), rendering the global fit acceptable to good.
If an alternative model had a significantly better fit, this model was subsequently compared against further reduced models.
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