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The best represented class II elements were those belonging to the Tc1-Mariner superfamily, one of the most diverse and widely distributed in nature.
Alphaproteobacteria were the best represented class in all rhizospheric soils collected, while Betaproteobacteria, which were not detected in Egypt, were equally represented in the other soil fractions in Italy and Tunisia and 3).
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Therefore, the system has to detect correctly not only the best represented classes ('speech' and 'speech over noise,' 77% of total duration) but also the minor classes (like 'music,' 5%).
The number of sequences linked to a particular class was used to rank the '100 best represented' classes (Figures S1 and S2).
The next best represented HTH classes are GntR, enriched in M. smegmatis with 62 assignments but with a small number of representatives in the pathogenic mycobacteria, and OmpR – 14 15 members in all mycobacteria excluding M. leprae.
The drawback to this approach is that it relies on an assumption that the shape of the classes can be best represented as Gaussian distributions.
The training data were taken from 80% of the sequences in the data set that best represents each miRNA class.
How should the ligands be best represented?
Uludag et al. [10] proposed two typical methods for automatic template selection: the first one, DEND, employs a hierarchical clustering strategy to choose a template set that could be best represents the intra-class variations.
Unlike currently used methods, SHOCSY iteratively "learns" the metabolic features best representing the biological classes in the data set and identifies irrelevant samples lacking these features.
Only four studies exist that may provide some comparison to the current study as they examined a variety of yoga postures which best represent a typical yoga class, similar to the current study [ 49- 52].
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