Sentence examples for best occurrence from inspiring English sources

Finally, I P, x i) assigns the score +1 to every match and a penalty −1 to every mismatch between P and its best occurrence within the i-th sequence.

Table 3 summarizes this analysis, considering the number of best occurrences.

MatScan [ 47] is used to search for best occurrences of a particular TF on each set of orthologs.

To output only K best occurrences, we store them in a priority queue, sorted such that the occurrence with minimum score is on top and thus can be removed, whenever the limit is exceeded.

To produce the initial set of predictions, we searched for best occurrences of each predictive matrix on the fruit fly genome with MatScan [ 47], discarding those hits with a similarity below 85% of each weight matrix.

The best occurrences of motifs 1 and 3 within V1R promoters frequently contain an "AAGTT" that matches the core binding site for the MYT1 zinc finger transcription factor; however, only ~a third of these motifs are recognized by the Genomatix algorithm [ 31] as a sufficient match to the MYT1 site.

In significant contrast, these authors found that the region predicting best the occurrence of neglect was the angular gyrus.

We use MotifScanner from the inclusive package by Thijs et al. (2002) to scan sequences for the best matching occurrence of a PWM; in case of an oligomer, we use a regular expression pattern with decreasing discriminative power to find the closest match.

We search for the top-ranking PWM reported on the training set in the remaining 20% of the positive and negative sequences and calculate the auROC from the distance of the best motif occurrences in the sequences from the reported PWM.

By sorting the motif occurrences, the best subset of occurrences in each motif group was being considered.

It is that between a thing, or type of thing, and (what is best called) an occurrence of it where an occurrence is not necessarily a token.