Sentence examples for best hits based on from inspiring English sources

KOG, OrthoMCL and TribeMCL assemble protein groups from multiple species – the former by merging 'triangles' of reciprocal best hits based on shared edges (followed by a variety of heuristic steps designed to improve sensitivity), while the latter two use a Markov clustering algorithm to form groups from a complex graph defined by pairwise sequence similarity scores.

We kept only the best hits based on the number of thresholds we established.

First, a pair-wise reciprocal blast was performed of which the best hits based on bit scores were selected.

Among the retrieved structural hits, adenosine kinase of Trypanosoma brucei (TbAdk) (PDB ID: 3OTX) [ 20] was found to be the best hit based on maximum sequence identity (53%) and was considered as template for homology modeling.

Thus, we report the identification of best five hits based on structure-based design and their in vitro enzymatic inhibition studies revealed IC50 values in the range of 35 80 μM.

Homologues represent reciprocal BLAST hits (including UBRH: unique best reciprocal hits; MBRH: multiple best reciprocal hits; and RHS: reciprocal hits based on synteny information) with an expectation (E -value < 1E -value BLASTP, BLOSUM62).

Each hit displays the respective query ORFs and its best Blast hit based on the selected KEGG database subset, and the corresponding Blast scores and e-values.

The producing team on the independent film, financed mainly by British backers, is representing it as a testosterone-laced "Devil Wears Prada," the Hollywood hit based on the best-selling contrivance about Anna Wintour and Vogue magazine.

The eudicot common and monocot common CNSs were searched against each other with a cut off e value of 0.001, using the eudicot common CNSs as the query and the monocot common CNSs as the subject, and the best hits selected based on the e value were searched in S el.

We preferentially annotated contigs (with best BLAST hits) based first on similarity to Plant Protein RefSeq, then based on H. brasiliensis PUT nucleotides, and finally on Non-Redundant of nucleotides from the NCBI database.

Orthology was determined using a reciprocal best hit strategy based on protein BLASTs of P. pastoris proteins against S. cerevisiae proteins and vice versa.