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The best appropriate model of protein evolution was selected in ProtTest v. 2.4 [ 51] using the Akaike information criterion.
MtMam+I was selected as the best appropriate model of protein evolution using both the slow and fast strategies in ProtTest with a proportion of invariable sites, pi = 0.822.
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The best-fit partitioning scheme and the appropriate model of DNA evolution for each partition were determined in PartitionFinder v1.0 [ 58].
Spontaneously hypertensive rats (SHR) were found to be the best characterized and also currently the most appropriate model of ADHD [ 45].
To find the appropriate model of evolution, we used jModelTest (Posada 2008) and found that the HKY + Γ model best fit the beta-keratin alignment in terms of Akaike Information criterion and number of parameters.
The appropriate model of sequence evolution including model parameters was calculated using Akaike Information Criterion AICC) with ModelTest 3.7 [ 127], and resulted in GTR+G as the best model for the ITS2 data set and in GTR+I+G for 18S rRNA analyses.
ProtTest version 2.4 (Abascal et al. 2005) was used to estimate the most appropriate model of amino acid substitution through both Akaike information criterion and Bayesian information criterion, suggesting that the JTT+G was the best-fit model.
We used MrModelTest [ 36] to determine appropriate models of nucleotide substitution and to choose best-fit model of sequence evolution for each partition.
We determined appropriate models of sequence evolution under the AICc4 criterion using Kakusan4106.
Verification is applied to get the best appropriate coefficient of landslide causal factors in the LR model.
PALM runs through tree-building processes of all available models and then identifies the most appropriate model in terms of the tree with the best likelihood -derived score by the model.
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