Sentence examples for benchmark set were from inspiring English sources

DN/ dS values of the benchmark set were extracted from Ensembl.

Since this is generally not the case for complexes involving multiple subunits or large conformational changes upon binding, such complexes in the benchmark set were not considered.

As the best filtering method resulted in 467 true positives (see Table  2), these 467 proteins (134 in 3D benchmark set and 333 in experiment benchmark set) were used to test the topology accuracies of the various prediction methods.

All residue residue pairs between subunits in the benchmark set were grouped into four bins based on their GREMLIN score (colors), and the distribution of residue residue distances (x axis) within each bin computed from the three-dimensional structures.

In addition, the best known solutions of the benchmark set are provided for the blocking flow shop scheduling problem with total flow time criterion.

The S27 circuit from the ISCAS89 sequential benchmark set is considered as case study for implementation in multilayer QCA using the proposed algorithm.

A third benchmark set was created for testing the discriminating ability of the various methods.

The benchmark set is derived from the evidence in the knowledge channel (see Methods section).

The benchmark set is available for download from the COMPARTMENTS web resource.

Therefore, it is important to take into account how a benchmark set was constructed when comparing the performance of different prioritization approaches.

The benchmark set was applied to five commonly used databases and revealed the impact of several biological and technical factors that challenge orthology prediction.