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Putative pathway components listed below were identified by BLASTX, using KEGG-annotated components [ 40] from Anopheles gambiae and Ixodes scapularis as search queries.
Orthologous genes for species pairs (see species names below) were identified by reciprocal best blast hits (RBH) using tblastx (Altschul et al. 1990).
Lancet lysozyme g sequences, used as outgroups for the phylogenetic analysis (see below), were identified by searches of the NCBI database [ 36].
Differential gene expressions among 4 cortical areas shown in Figure 1 A (and see below) were identified by RLCS as previously described (Suzuki et al. 1996; Shintani et al. 2004).
Insect and amphioxus lysozyme sequences, used as outgroups for the phylogenetic analysis (see below), were identified by searches of the NCBI ENTREZ protein database [ 49] for Drosophila [ 53] and amphioxus [ 54] lysozymes; these protein sequences were then used in tBLASTn [ 20] searches of the Ensembl [ 16] and NCBI databases [ 49] for related sequences.
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Since the chosen vmPFC region (see below) was identified by values of choice bias that were measured during the scanner session, we will report task details for this session only.
Outliers, defined as values over 4 SDS or below −4 SDS, were identified by inspecting the z-score plot of the variable under consideration.
The transparent board was filmed from below and the chess pieces were identified by symbols stuck to their bases.
In the first four matches evaluat ed, 29 teams were identified by mean scores below percentile 10.
Two platypus BAC clones (Oa_Bb-2L7 and Oa_Bb-131M24), which were sequenced but not yet annotated, were identified by computational analysis (below) to contain parts of the α-globin cluster and a ω-globin gene.
Cyclotides were identified by sequence fragment assembly (as explained below) and manual peptide sequencing.
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