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We created a series of binary exposure variables, each equal to 0 if the quantitative exposure was below a specified cutoff value and 1 if the exposure exceeded the cutoff.
For a new protein sequence, the probability that it could be generated by each HMM model is calculated and the protein is assigned to the family if the P-value is below a specified cutoff.
If the error ratio (Q = V/R) was required to remain below a specified cutoff (0.01), the FDR value should not exceed 0.01.
A common and simple method of segmentation is global thresholding, wherein voxels whose tomogram value fall below a specified cutoff are labeled as biomass.
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A straightforward metric for quantifying identifiability and systematic false positives is the number of teams that predict an edge at a specified cutoff in the prediction lists.
A relevance network, for example, is constructed by estimating the pairwise correlations between all random variables, connecting any pair with correlation exceeding a specified cutoff value [9].
GeneWaltz can search all locally maximal segment pairs with scores above a specified cutoff.
The Target2Compounds workflow accepts a protein target, specified with a UniProt accession number, and returns compounds that this target binds with an affinity better than a specified cutoff.
We attempt to solve the first problem by discarding all cells with BF higher than a specified cutoff frequency.
Probes with a MATscore bigger than a user specified cutoff were used to predict binding regions.
Finally, constant regions with values above or below specified cutoffs were detected as gained or lost regions, respectively.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com