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The drug-pathway interaction is the sum of docking scores over all proteins belonging to the pathway.
We model the horizontal transfer of sets of genes belonging to the pathway as follows.
Here, we highlighted five induced transcripts belonging to the pathway "clathrin-mediated endocytosis" (ACTA1, EPS15, HIP1, ORM1 and VEGFA).
In this example, the pathway 'Glycolysis' is chosen, and the reactions belonging to the pathway are shown.
The expected proportion of mutations occurring within a pathway is defined as the sum of the lengths of the genes belonging to the pathway over the sum of the length of all genes within the Staphylococcus aureus USA300-FPR3757 genome.
The gene-enrichment of functional pathways measured by determining the number of genes, belonging to the pathway in the list of significantly altered genes weigh against to the total analysed/printed genes on arrays (background) using Fisher Exact test.
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KEGG analysis showed an extensive enrichment of genes belonging to the pathways 'ribosome'lysosomeome', and 'complement and coagulation cascades'.
However, for pathways reconstruction the interaction data, intended as a simple "binary" relationship between two elements belonging to the pathways, are not sufficient.
The other potential target genes include the gene cluster SMU_1074-SMU_1077 which encode putative metabolic enzymes belonging to the pathways related to cysteine metabolism and is concurrent with the known role of cysR in cysteine metabolism [ 81].
The activity level of the pathway is then inferred by combining the log-likelihood ratios of the genes that belong to the pathway.
The effective diffusion coefficients of ATP and ADP that are obtained in this approximation are different due to the different interaction of ATP and ADP with the enzymes that belong to the pathway.
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belonging to the trail
belonging to the track
contributing to the pathway
belonging to the road
pertaining to the pathway
belonging to the sequence
belonging to the tract
corresponding to the pathway
pertained to the pathway
corresponds to the pathway
belonging to the motherland
belonging to the army
belonging to the state
belonging to the world
belonging to the cockney
belonging to the owner
belonging to the side
belonging to the apatite
belonging to the church
belonging to the past
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