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Considering the large number of available fungal genome sequences and those that are currently being sequenced, in addition to this data standardization scheme, a standardized pipeline for data extraction and management is needed to organize the data and to ensure orderly expansion of SNUGB.
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As mentioned earlier, 73 late (metastasis or relapse) cancer samples were sequenced in addition to the primary tissues.
Cox2-3 and rbcL-S regions were sequenced in addition to the SSU rDNA introns, to infer genealogical relationships of PSA populations.
The coding sequence of Y87G2A.5 in each of the suppressors was sequenced; in addition to the original bn2 missense change in exon 3, we found that the suppressors contained a second missense mutation in exon 3.
A total of 3,905 bp of RdRp from Bt-CoV/Tri/1CO7B and 5,160 bp from Bt-CoV/Tri/1FY2B were sequenced, in addition to 1,782 bp from the HEL domain of both samples (full sequence data not shown).
For a smaller cohort of individuals in whom longitudinal colonization with a KPC- Kp of the same sequence type (ST) was observed, the last isolate cultured from the patient was sequenced in addition to the first isolate in order to determine a molecular clock rate for the study K. pneumoniae.
All clones were sequenced from the 3' end ; in addition, 5' sequencing was carried on many clones from the libraries of highest quality or most relevant to our research goals.
Alternatively, when no high-density SNP data is available, the wild type pool can be sequenced at low coverage in addition to the mutant pool.
C. trachomatis positive samples comprising seven vaginal swabs and three urine samples were sequenced without prior in vitro culture in addition to nine cultured C. trachomatis samples, representing different serovars.
A range of important isolates have been sequenced, including MDR A. baumannii isolates, in addition to those that are susceptible to antimicrobials.
In addition LE/Stm was sequenced with two separate sequencing platforms: Illumina and SOLiD; these two datasets were treated as separate samples in the analysis.
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