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Signals are only updated at the beginning of a simulation cycle and are not updated immediately after execution.
The mentioned values are the initial values at the beginning of a simulation run.
At the beginning of a simulation, the situation in the network is very unstable and many cliques are created and broken from round to round.
At the beginning of a simulation run each node creates units until 30% (50 nodes) respectively 3% (1,000 nodes) of its storage of 900 MB is filled.
Figure 9 Performance of the basic k -clique matching protocol; percentages of nodes matched into cliques for various values of k plotted against: (a) number of rounds, (b) average number of cliques evaluated by a single node since the beginning of a simulation.
In particular, KD necessarily starts very low at the beginning of a simulation because in our settings the number of topics assigned to agents at start-up is limited and the total amount of skill is bounded (i.e., in these simulations, on average, agents at start-up have 5% of the total number of topics T).
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At the beginning of a first simulation the 2,000 synaptic weights are all equal to 0.475 (arbitrary units normalized in the range [0,1]).
At the beginning of the simulation the simulator allocates a pattern of travel for each EV.
Thus, at the beginning of a global-score simulation almost all amino acid mutations are accepted, leading to an acceptance rate ω = 1.
Interestingly, if the NMR restraints were removed and this γ dihedral angle was forced to be g+ at the beginning of a 25 ns simulation with the AMBER99 force field, then it rapidly switched to trans and returned to g+ only rarely (see Supporting Information).
At the beginning of the simulation, a conjugate gradient method is used to carry out energy minimization for eliminating the initial unreasonable factors during modeling process.
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