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Some of the genomes have not been sequenced with high coverage, for this reason we did not run CYNTENATOR on exactly the same species set.

First, whereas the macro-chromosomes have been sequenced with high coverage, the micro-chromosomes are still poorly covered [ 70].

In this respect, we will not consider the kinesin inventory of Bombyx mori because the genome has not been sequenced with high coverage and is highly fragmented.

In the case of unresolved segmental duplications, usually a large number of clones has been sequenced with high accuracy [ 9] and the clone coverage of the loci is well above-average of the entire human genome.

For plotting the presence or absence of dynactin subunits across the tree of the eukaryotes we only included those species whose genomes have been sequenced with high coverage and which provided reliable data in many other cases [ 48, 50- 52].

We expect this number to be very close to final, even though the genome assembly is still in draft stage [ 18], since the genome has been sequenced with high coverage (61 fold, [ 18]), and our gene identification approach is not sensitive to assembly quality.

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Similar(53)

Since the cDNA libraries were normalized, a significant proportion of rare transcripts should have been sequenced with higher probability than non-normalized libraries and contributed to the discovery of novel transcripts and genetic variants [ 28, 42].

These genomes are sequenced with high coverage and thoroughly annotated.

After manual interpretation of the acquired peptide fragmentation spectra, several peptides were sequenced with high coverage.

Eight strains of E. tarda were sequenced with high accuracy (>99.9%) with coverages from 50- to 400-fold.

However, more than half of the 95 miRNAs* (including the top three abundant miRNAs*: miR-1422f* miR-1422f* and miR-959**) were sequenced with high frequency in this study without their corresponding mandre strands (miR-133a*, miR-959 and miR-133a) detected.

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