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However, reads that align correctly to the outside edges of the duplicated segment could have been sampled from either the reference-like sequence or the variant sequence.
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Reads are sampled from either of the two haplotypes and no information is given about which one they come from.
Full depth articular cartilage from the medial tibial plateau (MTP) and lateral tibial plateau (LTP) was sampled from either the right or left stifle (knee) joint, randomly selected.
Firstly, all patients in these studies were sampled from either surgical settings [ 14- 16] or from a specialist shoulder referral centre [ 13].
The problem is referred to as 'haplotype assembly' (Lancia et al., 2001), which is challenging in the following two aspects: Reads are sampled from either of the two haplotypes and no information is given about which one they come from.
The additive genetic effects of all candidate QTL was sampled from either a standard normal distribution or a gamma distribution [shape parameter = 0.4, scale parameter = 1.66 (Meuwissen et al. 2001)].
All QTL effects were sampled from a normal distribution with either mean μ α =0 or mean μ α =0.2.
The QTL effects were sampled from a normal distribution with either mean μ α = 0 or mean μ α = 0.2.
Peripheral blood was sampled from the ophthalmic venous sinus of either infected or uninfected pigs as described previously [ 11].
White muscle (~200 mg) was sampled from each specimen and preserved in either DMSO solution (20% dimethylsulphoxide in saturated NaCl solution) or 70% ethanol solution.
Then, for each time point, replicate and node a measurement x itr was sampled from two Gaussian distributions, either from x itr ∼ 𝒩(1200, 400) if γ* itr = 0 or from x itr ∼ 𝒩(2000, 1000) if γ* itr = 1.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com