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Hence the same conclusion as for farnesyl diphosphate synthase can be made here: these compounds would not have been retrieved as putative inhibitors when searched with topological fingerprints and a Tanimoto similarity cutoff ≥ 0.7; however a different result would have been obtained using spectrophores in combination with an Euclidean distance cutoff ≤ 50.
Hence, these compounds would not have been retrieved as putative farnesyl diphosphate synthase inhibitors when searched with topological fingerprints and a Tanimoto similarity cutoff ≥ 0.7, while using spectrophores in combination with an Euclidean distance cutoff ≤ 50 would have retrieved all three compounds.
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The SEC23B and MYST3 genes which are involved in cartilage development were retrieved as putative targets of miR_10, which was also expressed during development.
The abstracts of all the citations were retrieved as well.
However, separated complexes were retrieved as well.
To further confirm that our new annotation strategy with CTT would correctly predict transcript models, we re-annotated each A. thaliana and O. sativa FBX locus predicted from the original proteomes from its 10-kbp flanking genomic DNA sequence, which was retrieved as a putative non-annotated FBX loci described above.
Hereafter, this technique will be referred to as the integrated k-Nearest Neighbour (kNN) algorithm, with k representing the number of putative candidates that are retrieved as functionally related to a query gene.
They are retrieved as pre-packaged facts".
The LSURef database version 90 was retrieved as ARB file.
The results were retrieved as absolute scores.
The identified articles were retrieved as fulltexts.
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