For numit rps13, M8 is significantly better than M7 and M8a in numit rps13 (P < 0.05) and 2.3% of sites are inferred to undergo positive selection (Table 2), suggesting there has been positive selection acting on numit rps13.
Among the 59 mt-cy families, twenty-seven (45.8%) were inferred to undergo gene duplication prior to the protostome/deuterostome divergence, twenty-nine (49.2%) after the protostome/deuterostome divergence but before that of fish/tetrapods and only three families (5%) within the tetrapod lineage (Table 1).
The Miyazaki Plain is also characterized by significant negative gravity anomalies (Fig. 11) and is inferred to have undergone aseismic crustal uplift in the Late Pleistocene and Holocene (Kono and Furuse, 1989; Nagaoka et al., 1991).
Pear and apple were inferred to have undergone a recent lineage-specific WGD, while peach, strawberry, and Chinese plum did not experience this event [ 49].
In all such cases, the Alu element was a member of an older Alu subfamily, which can be inferred to have undergone a gene conversion event along the human lineage, and does not represent a true AluYg6 insertion.
This substrate was then inferred to undergo intramolecular recombination, leading to heteroduplex recombinant formation initiated by pairing and strand exchange of the 3'-ending strand as inferred from the polarity of the splice junctions.
In congruence with the cladistic analysis, such an approach shows that different diurnal birds of prey taxa underwent different chromosomal changes, although many chromosomal characters were inferred to appear independently in different lineages.
They are inferred to have derived from debris avalanches.
While gene transfer into the mitochondrial genomes has been inferred [ 36- 39], mitochondrial genomes are expected to have undergone many fewer legitimate and illegitimate recombination events than free-living prokaryotes.
Members of the Kinesin-6 family that function in cytokinesis in animals are not inferred to have undergone any gene duplications in plants (in which both copies have been retained as functional genes).
