Sentence examples for been genotyped in reference from inspiring English sources
In this process the genotypes of SNPs which have been genotyped in reference datasets (such as HapMap with ~8 million SNPs genotyped), are being estimated for all Rotterdam Study samples using the basis Illumina 500 K SNP dataset configurations in each subject.
When estimates of allele frequencies based on population data are not available (i.e. variants that have not been genotyped in reference datasets such as 1000 Genomes or HapMap), we estimate the allele frequencies using the genetic marker information from pedigree members.
The E1b1b1c haplogroup was genotyped in samples from Einstein, MSKCC, PHS and HPFS; the R1b1a2 haplogroup was genotyped in samples from Einstein, MSKCC, PHS and AHS.
In many genomic selection programs, thousands of bulls which have been progeny tested over the last decades have been genotyped and are used as national reference populations.
CEPH 1347 02 DNA was genotyped as a reference control for allele size.
One fact is that the number of Landrace-Yorkshire crossbreds (4432) in the crossbred dataset was much larger than the number of Yorkshire-Landrace (1207) and most of the purebred sires were genotyped and included in the reference population.
When offspring were genotyped and included in the reference population for imputation, observed animal-specific imputation accuracies (Table 3) were higher than accuracies predicted based on selection index theory (Table 5), while in the Off0 scenario, the animal-specific imputation accuracies were similar to their theoretical predictions.
Thirty-nine HEV RNA–posamplessamples in the center's biobank from non-SOT patients were genotyped and used as reference for phylogenetic analysis.
The structure of the reference population could not be optimized by either genotyping other males because all progeny-tested males were genotyped or by choosing in the reference population the highly related males because of its size.
Prkdc was genotyped as given in (19).
Pkd2 alleles were genotyped as described in supplementary methods S1.
