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The Illumina GA reads have been assembled into contigs for each individual, with estimated assembly errors of 14.2 per megabase.
Sequence data have been assembled into contigs on a BAC-by-BAC basis and have immediately been released into the EMBL/Genbank/DDBJ DNA sequence databases.
The majority of sequences have been assembled into contigs (N50 = 2,370 bp) and supercontigs (N50 = 9,901 bp) with annotation presently unpublished.
As in the previous case, it shows that the Rho cassettes absent in our set have been produced by reads that had not been assembled into contigs.
These ESTs have been assembled into contigs such as Tentative consensus (TC) contigs ([ 10]; http://compbio.dfci.harvard.edu/cgi-bin/tgi/gimain.pl gudb=Wheat) along with data collated from the NCBI GenBank nucleotide database (full length and partial cDNAs).edu/cgi-bin/tgi/gimain.pl gudb=
To test the possibility that there were reads matching these pathogens that had not been assembled into contigs, we mapped the raw transcriptome reads from each library to the NCBI reference sequence from each of these pathogens.
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Reads were assembled into contigs using an assembler program, such as Newbler24.
(3) Assembly 2: The clones were assembled into contigs at 1×10-60.
The reads were assembled into contigs using Newbler assembly software, which is integrated into the GS FLX system.
Collectively for the four genomes, close to 27%% of all marked up molecules were assembled into contigs for final assemblies.
The resulting sequences were assembled into contigs using the CAP3 assembly program [ 36].
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