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Raw reads, bed alignment files, and raw gene counts, are available under the GEO accession number GSE35288 at the NCBI Gene Expression Omnibus [ 53].
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The present work describes the mass transfer process between a moving fluid and a slightly soluble cylinder buried in a packed bed, in alignment with the direction of flow.
In the Ferron sandstone samples, the Vph values are higher (∼8.5%) than the Vpv values, which is attributed to laminated bedding or alignment of grain orientation.
What is more, intensive mixing in the bed causes the alignment of the fluidized bed temperature.
The rigid nature of concrete and the weight of sleepers, in combination with the weight and speed of trains, causes the pulverization and crashing of the ballast (the gravel or broken stone laid in the railroad bed), changing the alignment of the line.
Importantly, don't have the foot of your bed in direct alignment with the door.
We merged and sorted the alignment BED files for the three biological replicates under saline conditions and used BEDTools [ 45] to create a large BAM file that contains nearly 250 million alignments.
In the clinical setting, intraoperative cup stability may be compromised by a number of technical errors, such as soft tissue entrapment, wobble during reaming causing inappropriate expansion of the acetabular bed, poor reaming alignment, and failure to deliver the cup coaxial to the reamed bed.
To facilitate comparisons with data produced by current DNA sequencing technologies, intersectBed and pairToBed compute overlaps between sequence alignments in BAM format (Li et al., 2009), and a general purpose tool is provided to convert BAM alignments to BED format, thus facilitating the use of BAM alignments with all other BEDTools (Table 1).
The coordinates of these SNPs were converted into BED format, and the alignment data at the SNP coordinates were extracted with SAMtools mpileup60.
The micro-structural analysis of the beds also shows particle alignment in response to the induced flow, which is qualitatively confirmed by a set of purposely-designed experiments.
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