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Moreover, 39 HC (10.6%) were not allocated to a control cluster because of missing genotypes in at least one of the best determining SNPs, when dropped down the control SNP tree.
A total of 58 CD patients (6.6%) could not be allocated to any of the CD subgroups because of missing genotypes for at least one of the determining SNPs.
aNumbers may vary because of missing genotypes.
A total of 96 progeny were excluded because of missing genotypes (18) or clonality (78).
Because of missing genotypes, the experiment was not completely balanced and we therefore used Type III sums of squares.
The quality-filtered dataset in the 1A5 × 1E4 cross included 261 progeny and 7333 SNP markers; 80 progeny were excluded because of missing genotypes (14) or clonality (66).
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Forty-eight animals were discarded because they had a high rate of missing genotypes (>10%).
Because of missing genotype and phenotype data, this analysis was limited to 803 individuals, reducing its statistical power.
All the subjects were genotyped (n = 106), and none was excluded because of missing genotype values.
The actual number of subjects per marker-phenotype analysis varied slightly because of missing genotype and phenotype data.
Compared with those excluded because of missing genotype data, the included individuals had slightly heavier birth weights (men P = 0.03; women P = 0.04) and included women were slightly taller throughout life (age 4 years P = 0.04; age 11 years P = 0.01; age 15 years P = 0.03; adult height P = 0.01).
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