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Because gene expression data are usually noisy, in reality, function (9) may be invalid and not robust.
We hope that our data will increase awareness about the sample status, because gene expression data may be potentially flawed from "aged" samples, particularly when dealing with clinical samples.
Nevertheless, this observation should be taken cautiously as mutations in developmental genes could cause lethality and also because gene expression data, mostly obtained from rodent species, might not be completely valid for humans.
However, because gene expression data were gathered from multiple time points after methapyrilene administration, it was possible to use the gene expression profiles over time to identify genes regulated in common and differentially in the two tissues.
The proportion of TF and TC genes with supporting evidence from gene expression data in millet Zhang gu is lower than that in maize TF and TC genes, because gene expression data is far less abundant in millet than in maize.
We were able to analyze the expression level for 52 of the genes in the BC tumor exomes but only 46 genes in the BC germline samples because gene expression data were provided for 304 tumor samples but only 39 germline samples from the TCGA [ 19].
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This is because, once gene expression data are aggregated at pathway level, the pathway expression data can not only be used for identifying differentially expressed pathways, but also for classification or clustering of samples in the space of pathways [ 3, 4], leveraging existing algorithms usually applied to gene expression data.
Because this gene expression data wasn't thought to be traceable to an individual, researchers have routinely deposited RNA results in public databases.
CI, confidence interval; HER2, human epidermal growth factor receptor 2. Because no gene expression data were available for our CBCS tumors, we sought to infer locus-specific CpG methylation correlations with gene expression in publically available TCGA breast tumor data.
Because the gene expression data is normalized and standardized, for a selected sample and a specific module M j, average expression of all genes in the module is used to represent the overall expression of the module in the sample:.
Because the gene expression data were measured in multiple samples, with the addition of some actin genes represented by more than one corresponding probes, the average value of actin gene expression using every probe in all samples was adopted as the expression level for this actin copy in each tissue.
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