For example, each result can be viewed in a sequence display window to analyse the genomic context of the identified TFBS.
Mr. Kent then started work on another program, called the U.C.S.C. browser, which allows the assembled DNA sequence to be viewed in terms of its structural features, like genes and chromosomes.
BamView has also been integrated into Artemis so that the reads can be viewed in the context of the nucleotide sequence and genomic features.
Consequently our inferences on the evolutionary relationship between putative wheat homoeologous sequences must be viewed in a critical manner.
Vector designs, primer, and barcode sequences can be viewed in a searchable database at http://plasmogem.sanger.ac.uk (Schwach et al., 2015).
Representative examples of PEST and FAINT domain distribution for TashAT and SVSP sequences can be viewed in [ 7] and in Additional file 1. Significant divergence has occurred between the TashAT and TpHN gene families [ 1, 15], and this is most easily detected by the specific absence of AT-hook DNA binding/nuclear localisation motifs in T. parva.
SNPs can be viewed in the context of the entire reference sequence in the expanded view window for each EST.
We routinely provide sequencing and QC summaries for our users, and the summaries corresponding to the datasets referenced in this manuscript can be viewed in Additional files 2, 3, and 4. Sequence files were processed and aligned as previously described [ 10].
All sequences retrieved and their associated annotations can be viewed in file S2.
However, when the two halftone frames are viewed in a sequence, if the change in their binary patterns does not "sufficiently" reflect the corresponding change in the continuous-tone frames, the halftone video can suffer from perceivable dirty-window-effect.
