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Taxonomic information on spiders (Araneae) was retrieved from the World Spider Catalog [ 6], which has the advantage of providing more up-to-date taxonomy than NCBI, as well as historic taxonomic information that can be used in database searches.
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CTI index with a precision of 10 digits after decimal point can be used in databases with millions of compounds.
The initial purpose was to design a fast and accurate measure of pairwise (dis- similarity that couldis- similaritythatses where traditional alignments were too slow (Blaisdell, 1986; couldnter et al., 2002; Hide et al., 1994).
Often substructure search algorithms are used in database search scenarios in which a database is scanned for all molecules that contain a given query structure.
This is similar as in the spaced-seeds approach that is used in database searching [ 23].
This sequence was used in database searches in order to obtain more MIPs belonging to this novel subfamily.
A program was created to evaluate the results obtained when the five HMMs were used in database searches.
A program, written in C, was created to manage the results obtained when the five HMMs were used in database searches.
Comparable approaches have been used in database projects like DELTA (DEscription Language for TAxonomy; [ 18]) although this program is neither readily accessible nor appropriate in its recent form.
The following parameters were used in database searching: fixed modification, carbamidomethyl (cysteine), variable modification, oxidation (methionine), Up to one missed trypsin cleavage was allowed.
Subsequently, genomic variants are used in database searches to pinpoint candidate genes whose function may be related to the observed phenotype.
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