Let (x^) be the probability vector after the graph exploration.
Let (x^{(t)}=left[ x_{1}^{(t)},x_{2}^{(t)},ldots,x_{n}^{(t)}right] ^{T}) be the probability vector, where the superscript T denotes the transpose of a matrix or a vector.
If we define D as the set of IBD = 2 loci among the measured variants and N as the set of IBD ≠ 2 loci, then N + D = G is the total number of measured variants and (2) and (3) Letting w = [ N D] be the probability vector for being in state IBD = 2 or IBD ≠ 2, we have w = wT.
The probability of every single state can be calculated by solving the Kolmogorov equations, written in matrix form hereafter: [dot{P}_{i} (t)] = [lambda_{ij} ],[P_{i} (t)] where [P i (t)] is the probability vector of the n states.
The symbol 'α' denotes the probability of moving from a node to a neighboring node (transition), and (1 − α) is denotes the probability of moving to a non-neighboring node (teleportation), as shown in (1): P = (1 - {{alpha }}) cdot {text{PA}} + {{upalpha text{r}}} (1 where 'r' is the probability vector distributed over U set of web pages and P is the PR vector solved by (1).
where V M k is the probability vector in the BBs, λ is a predefined threshold value, Avg represents the average fitness value in the whole population, B e s t _ F i t n e s s M k represents the best fitness value of TNFN with M k rules, and f i t M k is the sum of the fitness values of the TNFN with M k rules.
P0 is the probability vector at step 0, indicating that it is the initial probability vector with the sum of probabilities equal to 1. Similarly, P s is the probability vector at step s, in which the ith element holds the probability of finding the random walker at node i at step s.
Also let (P t)) be the probability row vector at time (t ge 0).
For each of the trio pairs at each of the SNPs being tested, the probability vector was calculated.
Once compiled, use within MATLAB is: where params is a vector of the model parameters [nu, mu, Q, tau], M is the number of phases, kh is a vector of count frequencies from 0 K, K is the maximum count, LL is the log-likelihood given the parameters and P is a the probability vector for the observed counts given the parameters.
be the probability that components of the vector are noiselessly transmitted, while the remaining positions are filled with an arbitrary vector generated with the probability.
