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Here too, a threshold needs to be set for expression data comparison to be done.
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A 16 March deadline has been set for expressions of interest in the club and it is believed that up to six potential bidders have emerged with serious plans.
Here we have assumed that proteins are active at their most peak points of gene expressions as discussed in Wang et al.'s work [ 11] and a similar threshold is set for the expression of each gene that is collected under continuous conditions.
Thresholds were set at 40th percentile for expression and for Top 150 probe sets that had the highest fold change difference in the target cell type compared with the Whole Cortex input.
They are fun to shoot because pretty lights, shadows and expressions are set up for you.
Based on the structure of the network, the approach introduced above, and the FBA results, kinetic expressions were set up for reactions r c and r d, since in this case matrix ∈; has full rank.
To increase the possibility of capturing even weaker effects of RpoN on gene expression, the threshold level for expression changes was set at 1.25 for comparison of the microarray transcriptome analysis and the computer prediction (Table 2 and Additional file 5).
One 64 bit Dell OptiPlex system with 8 G B Ram, core 2 Duo processor running at 3.33G H z is set aside for storing results of gene expression in a MySQL database server (D B S).
Dissected gonads were set aside for comet assay and gene expression analyses.
Deletion strains were compared to their respective control strain, which expression was set to 1 for each time point.
The threshold used for differential expression was set to p > 95% either for under or over expression.
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