4. ICEMR data can be searched in the context of all other data available in PlasmoDB, including expression data (transcriptomic and proteomic), population diversity data, metabolic pathways, and so on.
Each nrITS sequence was searched in nucleotide data base using BLAST, to confirm its plant origin rather than from a possible fungal contamination of the sample.
The genes corresponding to the proteins identified in the proteomic analysis were searched in the microarray data and a column with that data added to Table 1.
Clinicaltrials.gov and the EU Clinical Trials Register were searched in July 2012 for data on ongoing research.
Relevant papers were searched in the following data sources (1970 to July 2014): Medline, the Cochrane Library, EMBASE, CINAHL, Web of Science, Physiotherapy Evidence Database scale (PEDro) and China Biology Medicine disc.
When the two SNPs were searched in the ENCODE data, the loci for both rs2205960 and rs10489265 were found to lie within regions with enhancer histone marks, DNAse-I hypersensitivity, protein binding, or regulatory motifs in more than one cell type (Table 2).
The 110 phylogenetic marker genes recently used to reconstruct the species phylogeny of the closely relative B. vulgaris[ 21], or an extended dataset of 221 marker genes (see next section) were searched in the transcriptomic data coming from two caryophyllales species A. squarrosum (this study) and R. soongorica[ 14], with 67,741 and 46,203 predicted unigenes respectively.
To exploit the possibility that translate this knowledge to sand rice, the orthologs of these genes were searched in sand rice transcriptome data.
First, the intentionally buried property motifs were searched in the artificially derived peptide data containing intentionally buried property motifs.
Data were searched in bacterial proteomics database using Aldente in ExPASy Proteomics Server.
