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BED12 files can be retrieved, for example, directly from the UCSC Table browser (Karolchik et al., 2004) by selecting a gene track (e.g. RefSeq Genes) and selecting the option to create one BED record per 'Whole gene'.
For the latter, the corresponding nucleotide variations can only be retrieved, for example using SIFT (Kumar et al., 2009), when they correspond to a known SNP, stored for example in dbSNP (Sherry et al., 2001).
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The dbPPT entry, sequence ID (the ID in the database from which the sequence of the protein is retrieved, for example, UniProt Accesion) and the protein names (including gene name, gene synonyms, protein name and protein synonyms) are shown for browsing.
For example, E-MTAB-2584 E-MTAB-2584 E-MTAB-2584ronaimsp130 regulatoon investigateociceptioneuronals retrieved for AD since one of its author's name is Alzheimer.
Studies scoring 4 or 5, or with unclear scores (for example if the cancer sites included were not specified in the abstract) were retrieved for scrutiny (n = 80).
Samplessults about thaveossibeenoretrievedthe impactors are provided by the chemical identiforation of particlaboratorys inside the cranalysis
Medical files were retrieved for data analysis.
Unpublished data were retrieved for one study.
Full articles were retrieved for further assessment.
No data was retrieved for isolated fatigue.
Two indicators were retrieved for each journal.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com