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The original formulation of BMS includes a modal reduction of the boundary that must be recomputed for every wave vector.
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Therefore, the decreasing constant has to be recomputed for each channel m every time a speaker in any other channel m ′(m≠m ′) corresponding to the same output signal subset becomes active: c dec, m = c m - c min c max - c m ′ + ε · c inc, if STD ̂ m ′ = 1 ∧ W m, m ′ ISC = 0, 0, else.
recalc - should the arrays be recomputed for the plot?
However, if the compensator coefficients are adjustable, e.g., based on h1(n) or h2(n), the coefficients need to be recomputed for all needed PRN codes after adjusting the compensator coefficients.
Likelihood site-rates depend on the branch lengths and therefore have to be recomputed for each new subset.
Similarly, TIGER rates depend on the composition of site patterns in subsets so also have to be recomputed for each new subset.
Thus, these five values would not need to be recomputed for each variant pair at O(m n) total time cost; they could instead be precomputed outside the main loop at a total cost of O(m n) time and O(m) space.
Formally, because a suitable weight x must be recomputed for each targeted structure and GC-content, then the number M of iterations required for the converge can be accounted for explicitly, leading to time complexities in (if, i.e. without any tolerance) and (if ).
The element stiffness values are recomputed for the second iteration for each load increment except the first.
The K-means clustering on CPU involves multithreading where each thread associates a data vector to a centroid and finally the centroids are recomputed for the next iteration.
In the left image, the 5 classes (e.g. baguette, sliced, bran, sandwich, and non-bread) are shown, while in the right image, the non-bread class has been removed, and then, the SOM was recomputed for the remaining 4 classes, in order to highlight details among the MFS of the different bread types.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com