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Finally, Additional file 1 contains a user guide to the archeomagnetic/volcanic query form and a description of the global Holocene geomagnetic field models that can be queried through the database interface.
The time-series data (e.g. seismic amplitude, tilt, and GPS) can be queried through the VALVE (Volcano Analysis and Visualization Environment; Cervelli et al. 2002) interface, which allows a user to plot data from various monitoring stations over user-defined time periods.
This yields a standard set of tumour descriptions that can be queried through the web site.
Trait and functional annotations can be queried through the ontology browser using general keyword searches or by specific searches using ontology terms or accession IDs.
Second, they can be queried through the web interface or the application programming interface of the new EOL/Traitbank semantic web data repository of organismal traits (http://eol.org/traitbank).org/traitbank
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This database is queried through the first table, as these tables are linked together by gene IDs.
Using the chloroplasts as database, 818,142 long error-corrected PacBio reads were queried through the GMAP aligner.
The database back-end consists of several MySQL databases that are queried through the Perl-driven web front-end that dynamically generates HTML pages.
In addition, the database can be queried through a BLAST search, enabling users to identify homologs of a query sequences and to perform multiple sequence alignments using the MUSCLE program.
The data delivered by GraphSAW can be queried through various search forms which are described in more detail in the following.
The bibliographic database MEDLINE that can be queried through PubMed [ 1] contains over 20 million references of journal articles in the life sciences.
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