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Because they typically share low sequence conservation, however, catalytic function cannot be predicted from sequence analysis alone.
Overall, our results suggest that the interface type could be predicted from sequence and that interface-type specific mean-field potentials may be adequate for certain applications.
Putative modules were defined as co-expression genes that could be predicted from sequence motifs in promoters.
We show that SSRs are abundant within zebra finch ESTs, and that their genomic location can be predicted from sequence similarity with the assembled chicken genome sequence.
The identification of cis-regulatory elements on a genomic scale is complicated by the fact that, although TF sequence specificity is generally well-characterized in vitro, functional elements in the genome are in fact much sparser than would be predicted from sequence alone (Gao et al., 2004; Pilpel et al., 2001).
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Protein properties were predicted from sequence using a wide array of prediction methods.
However, quaternary interactions are not being predicted from sequence in the same way.
The binding sites were predicted from sequence (http://genome.ucsc.edu/) and validated experimentally (HTRIdb database).
These annotations thus indicate what was experimentally shown in an article and what was predicted from sequence comparison.
Transmembrane β-strands of TtOmp85 were predicted from sequence using three servers, Pred-TMBB, TMBETAPRED, and Psi_Pred.
The phosphorylation sites (His ~ P) were predicted from sequence alignments The locus tags are derived from the genome entries NC_006958, NC_003450, and BA000036, respectively.
More suggestions(15)
be annotated from sequence
be distinguished from sequence
be drawn from sequence
be discerned from sequence
be generated from sequence
be resolved from sequence
be obtained from sequence
be ascertained from sequence
be derived from sequence
be learned from sequence
be predicted from nodule
be identified from sequence
be extracted from sequence
be gained from sequence
be applied from sequence
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