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ChIP-seq experiments yield many ambiguous tags that can be mapped with equal probability to multiple genomic sites.
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Isocontours of equal elevations of pool margins were mapped with the TMB5 threshold, forming concentric rings that were assigned relative elevations according to the position that the pool edges intersected the reference transect.
Clusters of at least 2 improper pairs were identified where at least one end was mapped with quality greater than or equal to 20 and deletions were predicted using a custom Perl script.
We only used those TFBSs that are mapped with a core- and matrix score of greater than or equal to 0.9.
However, each transcript in RNA-seq can be mapped multiple times, and the sequencing depth of RNA-seq is correlated with but is not equal to transcript abundance.
So, mappable short reads can be mapped to the reference genome on the forward or the reverse strand with equal probability.
When using an energy-dispersive detector with good background rejection, the number of necessary incident energies is minimally equal to the number of species to be mapped.
ECRs are DNA regions that have been mapped to align with other genomes and are conserved with greater than or equal to 70% identity over at least 100 bp [ 38, 45].
All sequences that are mapped to a cluster with a promoter probability higher or equal to the threshold will be predicted to be a putative promoter.
This plot is mapped to the SINR of PSO with FFB and FBH with PwrAdj equal to 26 dB.
Cells with positive residuals were mapped to show areas of greater than expected extinction risk compared to cells with equal or negative residuals.
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