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Missing genotypes of descendants can be imputed accurately using low-density marker sets if ancestor haplotypes are available [ 13- 15].
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It has been reported that HD genotypic data for individual animals genotyped with the current Illumina 54 k bovine chip can be imputed accurately to 770 k using data from a group of representative animals that were genotyped with a HD marker chip with appropriate methods [ 6, 7].
One of the powers in sequence data lies in the ability to use rare variants for analysis, and these have to be imputed accurately in order to use them efficiently.
Missing data will be imputed using multiple imputation techniques.
Missing outcome data will be imputed using multiple imputation [ 52].
Missing data will be imputed using multiple imputation techniques [ 62].
Missing values will be imputed using multiple imputation techniques.
Missing data will be imputed using regression imputation.
Missing data will be imputed using multiple imputations [ 48].
SNPs can be imputed using either marginal or probabilistic genotypes.
Outcomes were imputed using multiple imputation [ 19], using the ice command in STATA to generate 5 sets of imputed values.
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