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It may be imported from databases using web services such as the Pathway Commons Web Service Client or the WikiPathways Web Service Client [ 31, 32] as a 'simplified binary model' (see Fig. Five in [ 33]) or it may be downloaded directly from the web.
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Building on the close collaboration which already exists between UniProtKB and the wwPDB, data related to interactions of proteins and small molecules will be imported from the PDBeMotif database (41).
In the case of newly collected material for an investigation, it depends on institutional workflows; the material may be first accessioned by the research collection and its metadata can then be imported from the institutional collection database, or vice versa.
The features can be imported from custom files, or from online databases, accessible from Bioconductor.
Data can be imported from Paradox, dBase, Foxpro or Access database tables, from text files, or via the Windows clipboard.
Genome sequence data and predicted gene information were imported from public databases.
But all this was trumped when, in making up the page that was to carry the Saturday prize puzzle for 20 August, the wrong puzzle was imported from the database and, instead of No. 25,406 by Brummie, the previous day's No. 25,405 by Araucaria was reprinted in the paper, while the correct puzzle was published on the website.
During method development, these MRM transitions were imported from the database to the MassHunter Data Acquisition program where these transitions were used for screening and confirmation purpose.
The content data are imported from each database.
In the laboratory, the reference image was imported from the database, aligned to the magnified live view from a serial tissue section, the AOI transferred to overlay the live image and guide the dissection, and finally a digital report in PDF format was generated.
The nodes and links used to construct this network database were imported from nine public databases, namely, EntrezGene interaction [16], MINT [17], DIP [18], CTD [19], TTD [20], ChemBank [21], PharmGKB [22], OMIM [23], and GAD [24] (Table 1).
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