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We show here that an informative neighborhood of residues can be highlighted from sequence data, which differs between helices (often 0 to 2 such neighbors) and strands (mainly 3 to 6 neighbors).
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Histidine bound to copper and zinc are highlighted on multiple sequence alignment.
All of the sequences will be highlighted in blue.
Here, the individual clusters or sequences can be highlighted based on the presentation in Figure 2.
Other impacts from heat exposure need to be highlighted as well.
Cellulases affiliated with GH9 are highlighted in green, GH12-affiliated sequences are highlighted in blue, GH5-affiliated sequences are highlighted in red and GH1-affiliated sequences are highlighted in yellow.
Viral sequences are highlighted in red, Saanich Inlet sequences in bold.
The sequence of the mature miRNA is highlighted in red and the complementary sequence (miRNA*) is highlighted in pink when present.
Aminoacids in the linear sequence that are missing from the structure are highlighted in light grey, if the full sequence information is available; otherwise they are shown as Xs.
The mature miRNAs were highlighted in yellow while miRNA star sequences were highlighted in green.
The mutated PAM sequence and its reverse complement sequence are highlighted in yellow.
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