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Thus, the obtained result is are remarkably close to the expected and miss-assignments of non-human sequences can be explained by sequencing errors alone.
It follows that these substitutions cannot be explained by sequencing errors.
These sequences exhibited differences that could not be explained by sequencing errors and possessed features indicative of functional paralogs.
Possible frame-shift mutations and phase variation in the restriction and modification genes, which could also be explained by sequencing errors, were not classified as disrupted (Budroni et al. 2011).
For the remaining eight SNPs, no differences were observed between cDNA and genomic sequences after re-sequencing suggesting that in the latter cases discrepancies between the RNA-Seq data and the genome sequence could be explained by sequencing errors in the initial RNA-Seq data set.
The data from FCGR3B#3 probe could not be explained by sequencing, as this probe lacked unreported SNPs or indels.
Similar(53)
To characterize the variant status, we consider two classes of models: 1) reference model M r, where all variants are explained by sequencing error or contamination; and 2) variant model M v, where variants are explained jointly by sequencing error and the presence of a variant allele at fraction f.
Since the presence of upregulated probes can hardly be explained by sequence divergence, we consider the upregulated clusters as the regions with increased transcriptional activity.
The flaA alleles of the three wild type strains were amplified by PCR and sequenced to determine if differences in the single culture phenotypes of the different flaA mutants on sprouts could be explained by sequence differences in the alleles.
This enrichment of SNVs in a short interval may perhaps be explained by sequence duplications/divergence.
Approximately 40% of the variation in gDNA hybridization ratios can be explained by sequence divergence, as measured by nucleotide dissimilarity between sequences.
More suggestions(18)
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