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Much information can be derived from sequence data.
Importantly, our model shows that these markers can be derived from sequence based on the predicted (with IUPred and DISOPRED2) disorder and two amino acid scales (Nozaki and Tanford, 1971; Zhou and Zhou, 2004).
However, most of the genes exhibiting apparent maternal, paternal, or novel banding patterns in cDNA-AFLPs actually showed additive patterns in genomic and cDNA CAPS analyses, indicating that the cDNA-AFLP fragment differences observed in T. mirus may be derived from sequence polymorphism and are not indicative of homeolog loss or silencing.
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Furthermore, a proportion of low frequency sequences are likely to be derived from sequencing errors of high frequency TcRs.
The remaining 46% did not show any polymorphism that might be derived from sequencing errors or mis-alignment between paralogous genes of the triplicated Brassica genome [ 60, 61].
This oft-cited hypothesis has been derived from sequence comparisons, topology profiling and analogies to a bacterial glutamate receptor with a K+-channel pore.
Evolutionary distances were derived from sequence pair dissimilarities calculated as implanted in MEGA 5 (Tamura et al. 2011).
The samples replicated in Dublin were sequenced, and genotypes were derived from sequence traces.
Currently, the GO annotation data stored in EasyGO are derived from sequence similarity search.
Typically, gene phylogenies are derived from sequence similarity (i.e., MSAs) and a phylogenetic reconstruction method.
The testis-specific promoters of the human and mouse SPAM1 genes are derived from sequence that was originally part of an ERV pol gene.
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