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If we assume a "Y-to-autosome" transposition occurred during evolution, we would expect this gene block to be conserved on the Y-chr of most, if not all, eutherians, but not conserved on autosomes.
The gene seems to be conserved on chromosome X within mammals, in close association with the DMD locus in man, rat and dog at least.
We considered an ELM to be conserved on an HIV-1 protein if it was present on more than 70% of the protein's multiple alignment.
Such putative miRNA might be conserved on the DNA sequence level as a part of longer functional transcripts and, therefore, were excluded from the conservation analysis.
In the absence of recombination, we expect the ordering to be conserved on the 3′ (leader-distal) end of the CRISPR array and diversified on the 5′ (leader-proximal) end.
Recent analysis of one chromosome shows that recombination hot spots are conserved between S. cerevisiae and S. paradoxus (Tsai et al. 2010), which suggests that they may be conserved on all chromosomes among all Saccharomyces species.
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It is therefore important that these landraces are conserved on-farm as well as ex situ and genetic studies undertaken on them as they might harbour useful traits that may find utility in rice improvement.
Phosphorylated tyrosines on Drosophila are conserved on more than one human protein with equivalent molecular function even if they are distantly related, irrespective of the extent of protein homology.
Although sequence conservation has been used, our method finds sequences which are conserved on average in a promoter region.
Furthermore, an Rbpjκ binding site is conserved on the promoters of Nrf2 among animal species.
Our model deals with collisions between weighted particles of arbitrary species, conserving energy perfectly in each collision while momentum is conserved on the average.
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