For instance, if CM334 and Maor were rendering a G allele at a given position and Early Jalapeño was carrying a C allele at the same position, then the position was called a putative SNP.
A position was called a putative SNP if two out of three pepper accessions/lines had the same homozygous allele (minimum depth of 10 reads), but different from the third homozygous accession.
The remaining 75 reads were marked as 'unclassified variants', as they did not fulfil all assumptions to be called a 'putative allele' but could not be classified as 'putative artefacts'.
A putative exon is called a true positive (TP) when both ends of the putative exon match a clearly orthologous exon.
A putative gene is called a true positive when the gene exactly matches a RefSeq gene.
A putative exon is called a false positive (FP) when both ends of the predicted exon are within or match a potential non-exon.
A putative gene is called a potential non-gene (FP) when all the exons of the gene are located in potential non-exons.
This extended set of areas can be called the putative Mirror Neuron System (pMNS) in order to emphasize that if a voxel in an fMRI experiment is involved in both execution and observation, the neurons within these voxels can, but do not have to, be mirror neurons [21], [32]: different populations of neurons within the same voxel could play the lead role during observation and execution.
The name "Laozi" is best taken to mean "Old (lao) Master (zi)," and Laozi the ancient philosopher is said to have written a short book, which has come to be called simply the Laozi, after its putative author, a common practice in early China.
The use of T2 would change the genotype composition for 12 individuals, with a total of 17 variants that would fail to be called 'putative alleles'.
But of course to be meaningful, the decision must have some 'content' — what it is about — which may be called its 'putative' content (Charland 2001).
