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The bEST-DRRD may be browsed using several different options.
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This relatively small area has been labelled the "darknet", and it can only be browsed using services like Tor (The Onion Router) or Freenet, which are based on multilayered concepts of anonymity designed to make both the visitors and the web pages (styled as.onion) incredibly difficult to trace.
EuroPineDB can be browsed intuitively using several tabs, and data can be retrieved by text terms or sequence similarity using a stand-alone BLAST implementation.
Location distribution maps, expression annotations, and 3D templates can also be browsed quickly using the "Advanced Tools" function [Figure 4].
It is available at http://bond.unleashedinformatics.com/downloads/data/BIND/spec/ and can be browsed online using the ASN.1 browser at http://software.dumontierlab.com/asn-browser/.
Rather than using any of these programs or a combination of them as strict filters we generated a database containing all the results that could be browsed or searched using various criteria to extract particular gene families of interest.
The AS events can be systematically browsed using GBrowse, and the CDS annotations were added using the GFF file of the annotated genome downloaded from Phytozome.
Data are presented via a browser in tables where summary facts can be conveniently browsed using hyperlinks, enabling users to drill all the way down to the MS/MS data.
In addition, individual peptide identifications can be conveniently browsed using hyperlinks, enabling users to drill all the way down to the MS/MS data.
Data can be browsed and downloaded using a standard web browser.
Improved pairwise and multiple alignments for 6420 domains can be browsed or searched using key words.
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