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The amniote or mammalian expansion of the HOXD13 and HOXD11 proteins can be attributed to sequences rich in alanine, glycine, serine and proline.
The proportion of male reads that align to these centromeric sequences is much higher than that of female reads (1.2 × 10-5 vs. 3.2 × 10-6), although it is unclear how much of this can be attributed to sequences contained in the neo-Y or the ancestral Y chromosome.
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The differences can be attributed to sequence effects rather than structural effects.
According to Goicoechea (2009), this seemingly controversial placement of Oryza brachyantha could be attributed to sequence conservation between AA and FF genomes in some of the loci under investigation.
However, there still remain one half of those differences that can be attributed to sequencing errors.
The large branch found for Myotragus in the phylogenetic tree (Figure 3) could be attributed to sequence changes due to DNA damage or to an accelerated evolution of the Myotragus genome.
A change in filtering settings would affect both data sets, with the difference remaining, and it is likely that this difference can be attributed to sequence length (average mRNA length 1784 bp).
This might be attributed to sequence and structural motifs controlling the editing efficiency.
More likely, divergences may be attributed to sequence uncertainties in the Bianchera plastome sequence deposited in GenBank.
Therefore, the observed sequence variations detected within mature miRNAs can be attributed to sequencing errors and/or to sequence variations between the query and the reference genome.
This initial set of 92,814 SNPs and 15,060 InDels was then subjected to filters to eliminate the number of differences that might be attributed to sequencing errors.
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