Sentence examples for be assigned a genotype from inspiring English sources

To be assigned a genotype a BAC had to have at least 5 probes that were assigned a genotype of B73 or Mo17 and these probes had to exhibit at least 80% genotype agreement within the BAC.

An important final consideration is that material identified in breeding programs can be assigned a genotype.

SNPs that cannot be assigned a genotype are returned as "no calls" and shared "no calls" for sample pairs were not considered a difference.

After finding variable positions, each individual F2 must be assigned a genotype (homozygote for either allele or heterozygote) at each site (step 3a).

A SNP with a BAF or LRR value not located within close proximity to an allelic cluster cannot be assigned a genotype and is thus labeled a No Call (NC).

Accounting for obligate missingness, we discarded samples with a genotyping rate of below 89.47% (corresponding to less than 17/19 SNPs being assigned a genotype), and SNPs with (i) a genotyping rate below 90%, (ii) a minor allele frequency (MAF) below 1%, or (iii) a combined sample Hardy Weinberg test p-value below 10-10.

All probes with values less than 0.33 were assigned a genotype of B73 and probes with values greater than 0.66 were assigned a genotype of Mo17.

All probes having values of less than 0.33 was assigned a genotype of B73, while probes having values greater than 0.66 were assigned a genotype of Mo17.

Probes that were significantly different (q<0.05) from B73 but not from Mo17 in the RIL hybridizations were assigned a genotype of B (Class I) and probes that were different from Mo17 but not from B73 were assigned a genotype of M (Class II).

Each library in the simulated data was assigned a genotype, with a probability proportional to the number of libraries of that genotype in the real data (this proportion was adjusted as each simulated library was assigned a genotype).

Otherwise, a site is assigned a genotype AB if the frequency of the B-allele is between 0.2 and 0.8, and a genotype of BB if this frequency is >0.8.