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In addition, network completion can be applied to inference of networks by starting with the null network.
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First, however, a brief note on how the causal model of knowledge is applied to inference.
Bayesian inference has been applied to inference of phylogenetic trees for cytochrome b [ 25], elongation factor 1α [ 26], hydroperoxidases [ 27], 3-hydroxy-3-methylglutaryl coenzyme A reductase (HMGR) [ 18], membrane-intrinsic protein [ 28], and concatenated mitochondrial protein [ 29] and larger [ 30] datasets.
"Justified" or "valid" are predicates that are applied to inferences on this basis.
Maximum likelihood (ML), maximum parsimony (MP) and Bayesian inference (BI) methods were applied to infer phylogenetic relationships.
We are beginning to explore how stream processing engines such as Kafka and Storm can be used to process network event streams, how scalable machine learning can be applied to network inference, and how the output from these algorithms can be used to enable networks that are self-tuning.
The same reasoning can be applied to the inference of recombination cold spots, regions where recombination might lead to disruption of protein function [43].
This model extends the vector autoregression (VAR) model, which can be applied to the inference of nonlinear time-dependent biological correlations such as dynamic gene regulatory networks.
Thus, it is time consuming to run a single-pair algorithm n−1 times to solve the single-source problem, and thus a single-source algorithm should be applied to this inference problem.
In the other phylogenetic analysis camp, scientists advocating "character congruence," simultaneous or combined analysis, proposed that the principle of total evidence (sensu Kluge 1989, 1998; Barrett et al. 1991; Kluge and Wolf 1993; Rieppel 2005) should be applied to phylogenetic inference.
The state comptroller, then Miriam Ben-Porat, felt that the law could be applied to the candidates by inference.
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