All of the 172,335 assembled unigenes were annotated in databases of Nr, Nt, Swiss-Prot, KO, PFAM, GO, KOG using the BLAST algorithm (E-value < 1E-5).
Currently, virtually all homologues of MenJ are annotated in databases as GGRs, as the MK reductases were previously unknown.
In total, 16 of these regions were annotated in databases as genes encoding hypothetical proteins with no predicted function, and five were annotated as pseudogenes.
Second, data incompleteness and differences in the way data were annotated in databases and medical charts render it difficult to define the cause of HL after RT.
Of the total 18 TFBS classes that occurred in an ortholog-specific manner, about 67% (12) have been annotated in databases with key words related to abiotic and biotic stress responses including temperature extremes, dehydration, UV, oxidative stress, salinity, pathogens and wounding as well as responses related to ABA and ethylene signaling.
A total of 12,479 unigenes could be annotated with at least one database, and 1593 unigenes could be annotated in all queried databases.
More than 100 manganese catalase genes have been annotated in genomic databases, although the assignment of many of these putative manganese catalases needs to be experimentally verified.
Based on RNA-Seq, a total of ~221 million clean reads were assembled denovo into 139,756 unigenes, including 42,140 unigenes that were annotated in public databases.
Currently, there are approximately 700 known An. gambiae proteins that are annotated in the databases.
We thereby identified three additional intact lysozyme-like genes in the human genome; these have been annotated in the databases, but not reported in the literature.
