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The SNPs within this set can then be analyzed for interactions using combinatorial methods.
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Dock pose of each ligand was analyzed for interactions with the receptor.
The docked binding mode was analyzed for interactions between compounds and the key residues of CDK8.
Data from 855 high-grade glioma cases and 1,160 controls from 4 geographic regions of the United States during 1997-2008 were analyzed for interactions between allergy and smoking histories and inherited variants in 5 established glioma risk regions: 5p15.3 (TERT), 8q24.21 (CCDC26/MLZE), 9p21.3 (CDKN2B), 11q23.3 (PHLDB1/DDX6), and 20q13.3 (RTEL1).
(B ) Extracts from embryos co-expressing either HARobo1 or HARobo2, and either Robo1∆C-Myc or Robo2∆CMyc were analyzed for interactions.
The (combined) genotypes of predicted low and low/intermediate enzyme activity (see Table 3) were analyzed for interactions, when genotypes had similar effect sizes (decreased or increased risk).
Then, GST genotypes associated with either a decreased risk (OR < 1) or increased risk (OR > 1) were analyzed for interactions by logistic regression analyses.
To identify the mechanism of interaction between bestrophin-1 and β-subunits of Ca2+ channels, bestrophin-1 sequences were analyzed for interaction domains (Figure 3A).
Lists were also loaded and analyzed with GenMAPP [ 13] and genes altered by SV40 ST were analyzed for interaction with the Wnt signaling pathway.
Distinct cell populations need therefore to be analyzed for a better understanding of their potential interactions.
Proteins were analyzed for their interactions and signaling pathways using Search Tool for the Retrieval of Interacting Genes/Proteins (STRING) database version 9.0 (http://string.embl.de) and the Ingenuity Pathways Analysis (IPA) software (http://www.ingenuity.com), respectively.
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