Sentence examples for be aligned using the from inspiring English sources

However, in BS-Seq, bisulfite-induced nucleotide substitutions (BINS) are ubiquitous, causing most reads to contain too many color-space mismatches relative to the reference sequence to be aligned using the standard color-space alignment tools.

In addition, for the whole-genome search on T.maritima, out of 354 total superfamilies within the SCOP class 'All beta proteins', 288 (81%) of which contain at least two protein chains, 207 superfamilies (71%) were structurally consistent enough to be aligned using the Matt (Menke et al., 2008) structural alignment program.

Out of 354 total superfamilies within the SCOP class 'All beta proteins', 288 (81%) of which contain at least two protein chains, 207 superfamilies (71%) were structurally consistent enough to be aligned using the Matt (Menke et al., 2008) structural alignment program.

Nevertheless, MAQ offers a very simple program that aims to recover indels from the reads that had to be aligned using the Smith-Waterman algorithm.

On the other hand, recent reports showed that CNT networks can be aligned using the nanoscale-wide molecular patterns.

These cues were used to identify local subalignments against which each Phrap product could be aligned using the G-INS-i algorithm and seed method in MAFFT [ 82, 83].

Subsequently, these alignments were aligned using the profile-profile alignment option in MUSCLE.

The consensus sequences were aligned using the Silva aligner (www.arb-silva.de, March 23, 2010).

Archaeal 16S rRNA gene sequences were aligned using the NAST alignment server [65].

Sequences were aligned using the MAFFT alignment algorithm.

The two sequenced genomes were aligned using the genome alignment software progressiveMauve [ 66], using default options.