This was accomplished using software accessible through the openModeller project [ 60].
De novo gene prediction was accomplished using software, glimmerHMM [ 48] and GENEID [ 49, 50], trained specifically for A. candida using our cDNA data.
At the ground-floor level, involving SOPs and other regulatory paperwork, validation can be accomplished using a software tool (SciPort) [ 34] for electronic data entry and analysis.
The validation of their hardware and software on a common platform can be accomplished using FPGA-based prototypes.
Graphic representation was accomplished using GNUPlot software or IDL data analysis and visualization software (Exelis).
LC/MS instrumentation operation and data collection was accomplished using MassLynx software (v4.1: Waters Corp), and all resulting spectra were processed and analyzed using ProteinLynx Global Server software (v2.4; Waters Corp).
Stimulus presentation and response collection were accomplished using Presentation software (Neurobehavioral Systems Inc., Albany, California, USA).
Automation of data acquisition and processing is accomplished using AutoChrom software from ACD\Labs.
The relative importance of the factors through AHP pair wise scale matrix was accomplished using Expert Choice Decision software for different field experts.
Image processing was accomplished using Metamorph software (Universal Imaging).
