Sentence examples for batch of sequences from inspiring English sources

Using the SSR server, users can upload a batch of sequences in FASTA format and select the motif type and repeat length to search.

Query 3 allows Blast searches (blastn, tblastx, tblastn) for a user-specified sequence (or batch of sequences) in the EUCAWOOD database.

In both the GO and KEGG pathway search pages, ESTMD allows users to search GO and pathways not only by single gene name, symbol, or ID, but also by using a file that contains a batch of sequence IDs or FlyBase IDs.

For data submission, we have provided a template file in EXCEL format, which enables users to upload batches of sequences and information via email.

Ergatis was designed to support batch processing of sequences in a high-throughput environment using compute grids.

The basic work-flow of a fully automated MLTreeMap run proceeds as follows: First, a batch of input sequences (i.e., un-annotated nucleotide sequences) are searched for the presence of marker genes, by running BLASTX against a curated collection of reference proteins (including 'off-target' proteins where necessary).

The program is the more efficient, the larger the batch of query sequences is.

A first batch of 2211 sequences, obtained by Genome-express (Grenoble, France), has been deposited in the GenBank database [GenBank: GW824594- GW826804].

For every such processor and batch of allocated sequences, RNAhybrid is run separately; output is manipulated and parsed for coordinates, separately and concurrently.

The VQSR component of GATK reduced type 2 errors (β, false positives) in batched analyses of sequences in population research [ 28].

Pol sequences were aligned by Muscle in batches of 1000 sequences, then these partial alignments were merged using the HXB2 reference sequence as a guide.