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Exact(12)
Batch effects were removed using the BFRM algorithm, and MP1 expression levels were examined.
Batch effects were removed by aligning the within-batch medians for all measurements.
Batch effects were removed using the ComBat algorithm in the SVA software package (19).
Batch effects were removed using the ComBat algorithm in the sva package [ 30].
Batch effects were removed from the intracellular data set using LOESS.
The eight datasets were then combined, and batch effects were removed using the BFRM algorithm (Yuwanita and Andrechek, Unpublished).
Similar(48)
A strong batch-effect was removed by ComBat, eliminating technical differences across data collection sites, while conserving meaningful variations (Supporting Information Fig 1A and B) (Chen et al, 2011; Johnson et al, 2007).
If batch effects were present we removed them using the combat function [ 28].
First, the 'family' effect was removed from the data using the ANOVA model (2) h i = μ + dye + block + family + batch + person + ε i.
As a result, the batch effect was largely removed by ComBat.
This was a favourable situation for the use of batch correction algorithms, and accordingly, the batch effect was perfectly removed by the ComBat algorithm.
More suggestions(17)
batch effects were sampled
batch effects were avoided
batch effects were monitored
batch effects were associated
batch effects were assumed
batch effects were identified
batch cultures were removed
batch effects were found
batch effects were confounded
batch effects were assessed
batch effects were reduced
batch effects were divided
batch effects were adjusted
batch effects were ruled
batch effects were tested
batch effects were minimized
batch effects were pulled
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