Sentence examples for basis of the alignment from inspiring English sources

Scaffolds were assigned onto corresponding linkage groups on the basis of the alignment result with the RAD alleles (Supplementary Table 9).

This region was isolated by PCR with primers designed on the basis of the alignment of conserved sequences from the alkB gene region from different n-alkane degrading Rhodococcus bacteria.

The positions of SSR markers were determined on the basis of the alignment between the primers and the genomic sequence of Nipponbare; a maximum of one mismatch or indel was allowed in e-PCR.

We defined the alignment time of each step as 0 s, and calculated mean values of a 0.2 s time window on the basis of the alignment of each step.

As for BOS velocity, we set windows from −0.3 to 0.6, at every 0.1 s, on the basis of the alignment of the second step as depicted in Fig. 3A, and windows from 0 to 0.5 on the basis of the heel strike of the third and fourth steps respectively, as depicted in Figs.

The key positions of class A GPCRs, calculated on the basis of the alignment of the 7-TMs, are visualized in Figure 6 in the 3D crystallographic structures of rhodopsin (panel a), the β2-AR (panel b) and the β1-AR (panel c).

On the basis of the alignments of haplotigs to GRCh37, haplotig A and B were localized to compare partner sequences.

On the basis of the alignments and phylogenetic analyses, each parasite isolated from the 3 dogs was shown unequivocally to be O. lupi.

By comparison, direct alignments between optical maps provide a complementary view of the genetic variations between individuals, and differ from other comparative techniques in that fragment patterns, instead of nucleotide matches, form the basis of the alignments.

The essence of the T-REX approach is in comparison of two trees: a larger gene content tree T, such as the one shown in Figure 1, and a smaller tree constructed on the basis of the alignments of protein sequences from each individual POG (a sequence family tree T sf ).

On the basis of this alignment the authors proposed a different consensus motif for alcohol-binding sites.